{ "_id": "6a293444732311cd875a797f", "Package": "arsenal", "Title": "An Arsenal of 'R' Functions for Large-Scale Statistical\nSummaries", "Version": "3.6.4.0000", "Date": "2024-05-15", "Authors@R": "c(\nperson(\"Ethan\", \"Heinzen\", email = \"heinzen.ethan@mayo.edu\", role = c(\"aut\", \"cre\")),\nperson(\"Jason\", \"Sinnwell\", role=\"aut\"),\nperson(\"Elizabeth\", \"Atkinson\", role=\"aut\"),\nperson(\"Tina\", \"Gunderson\", role=\"aut\"),\nperson(\"Gregory\", \"Dougherty\", role=\"aut\"),\nperson(\"Patrick\", \"Votruba\", role=\"ctb\"),\nperson(\"Ryan\", \"Lennon\", role=\"ctb\"),\nperson(\"Andrew\", \"Hanson\", role=\"ctb\"),\nperson(\"Krista\", \"Goergen\", role=\"ctb\"),\nperson(\"Emily\", \"Lundt\", role=\"ctb\"),\nperson(\"Brendan\", \"Broderick\", role=\"ctb\"),\nperson(\"Maddie\", \"McCullough\", role=\"art\")\n)", "Description": "An Arsenal of 'R' functions for large-scale statistical\nsummaries, which are streamlined to work within the latest\nreporting tools in 'R' and 'RStudio' and which use formulas and\nversatile summary statistics for summary tables and models. The\nprimary functions include tableby(), a Table-1-like summary of\nmultiple variable types 'by' the levels of one or more\ncategorical variables; paired(), a Table-1-like summary of\nmultiple variable types paired across two time points;\nmodelsum(), which performs simple model fits on one or more\nendpoints for many variables (univariate or adjusted for\ncovariates); freqlist(), a powerful frequency table across many\ncategorical variables; comparedf(), a function for comparing\ndata.frames; and write2(), a function to output tables to a\ndocument.", "URL": "https://github.com/mayoverse/arsenal,\nhttps://cran.r-project.org/package=arsenal,\nhttps://mayoverse.github.io/arsenal/", "BugReports": "https://github.com/mayoverse/arsenal/issues", "VignetteBuilder": "knitr", "License": "GPL (>= 2)", "RoxygenNote": "7.1.1", "LazyData": "true", "Encoding": "UTF-8", "Repository": "https://mayoverse.r-universe.dev", "Date/Publication": "2024-08-15 15:42:27 UTC", "RemoteUrl": 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Add multiple sets of adjustors to the model", "Available Function Options", "Summary statistics", "modelsum.control settings", "summary.modelsum settings" ], "created": "2016-12-13 23:08:20", "modified": "2021-05-19 13:17:10", "commits": 26 }, { "source": "paired.Rmd", "filename": "paired.html", "title": "The paired function", "author": "Ethan Heinzen, Beth Atkinson, Jason Sinnwell", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Simple Example", "NAs", "Available Function Options", "Testing options", "paired.control settings", "summary.tableby settings" ], "created": "2018-07-18 16:25:18", "modified": "2019-12-27 17:51:53", "commits": 5 }, { "source": "tableby.Rmd", "filename": "tableby.html", "title": "The tableby function", "author": "Beth Atkinson, Ethan Heinzen, Jason Sinnwell, Shannon McDonnell and Greg Dougherty", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Simple Example", "Pretty text version of table", "Pretty Rmarkdown version of table", "Data frame version of table", "Summaries using standard R code", "Modifying Output", "Add labels", "Change summary statistics globally", "Change summary statistics within the formula", "Controlling Options for Categorical Tests (Chisq and Fisher's)", "Modifying the look & feel in Word documents", "Additional Examples", "1. Summarize without a group/by variable", "2. Display footnotes indicating which \"test\" was used", "3. Summarize an ordered factor", "4. Summarize a survival variable", "5. Summarize date variables", "6. Summarize multiple variables without typing them out", "7. Subset the dataset used in the analysis", "8. Create combinations of variables on the fly", "9. Transform variables on the fly", "10. Subsetting (change the ordering of the variables, delete a variable, sort by p-value, filter by p-value, show only certain by-levels)", "11. Merge two tableby objects together", "12. Add a title to the table", "13. Modify how missing values are displayed", "14. Modify the number of digits used", "15. Create a user-defined summary statistic", "16. Use case-weights for creating summary statistics", "17. Create your own p-value and add it to the table", "18. For two-level categorical variables or one-line numeric variables, simplify the output.", "19. Use tableby within an Sweave document", "20. Export tableby object to a .CSV file", "21. Write tableby object to a separate Word or HTML file", "22. Use tableby in R Shiny", "23. Use tableby in bookdown", "24. Adjust tableby for multiple p-values", "25. Tabulate multiple endpoints", "26. Tabulate data by a non-test group (strata)", "Available Function Options", "Summary statistics", "Testing options", "tableby.control settings", "summary.tableby settings" ], "created": "2016-12-13 23:08:20", "modified": "2024-05-15 16:58:44", "commits": 65 }, { "source": "write2.Rmd", "filename": "write2.html", "title": "The write2 function", "author": "Ethan Heinzen", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "A note on piping", "Examples Using arsenal Objects", "tableby", "modelsum", "freqlist", "comparedf", "Examples Using Other Objects", "knitr::kable()", "xtable::xtable()", "pander::pander_return()", "Output Multiple Tables to One Document", "Output Other Objects Monospaced (as if in a terminal)", "Add a YAML Header to the Output", "Add a Code Chunk to the Output", "FAQs", "How do I suppress the note about my document getting rendered?", "How do I look at the temporary .Rmd file?", "How do I prevent my document from being rendered?", "How do I output headers, raw HTML/LaTeX, paragraphs, etc.?", "How do I tweak the default format from write2word(), write2html(), or write2pdf()?", "How do I output to a file format other than word, HTML, and PDF?", "How do I avoid prefixes on my table captions in PDF?", "How do I output multiple tables with different titles?", "Why is write2() not working in R Markdown/R Studio?" ], "created": "2017-01-18 21:12:31", "modified": "2020-10-14 14:22:26", "commits": 24 } ], "_score": 12.674567816411953, "_indexed": true, "_nocasepkg": "arsenal", "_universes": [ "mayoverse", "eheinzen" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "3.6.4.0000", "date": "2026-06-10T09:53:13.000Z", "distro": "noble", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "aa93fe75114df6b9dfc4e596cf4994f70e2aa3909e4b7c56499d59e53c66c60e", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.6.0", "os": "linux", "version": "3.6.4.0000", "date": "2026-06-10T09:53:03.000Z", "distro": "noble", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "f7e213d7bf3909bc41946157fc52ffe16d96f72a60083dae4f2ef2effdbb4707", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.5.3", "os": "mac", "version": "3.6.4.0000", "date": "2026-06-10T09:52:31.000Z", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "66562d88e0a5023e064be49cdbd02a660dd3c1c2d01c28f8e652d1c9ca931806", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.6.0", "os": "mac", "version": "3.6.4.0000", "date": "2026-06-10T09:52:37.000Z", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "445226fd2f5f7a1f189e9bd88dc9baf6a9c8b88acac3f0c0b519a675e0395e3e", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.6.0", "os": "wasm", "version": "3.6.4.0000", "date": "2026-06-10T09:52:38.000Z", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "ca96dcb3c81551ed1cbf1b82f9293547c7c1688ef27ac0fc83e5081a9d4211e7", "status": "success", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.7.0", "os": "win", "version": "3.6.4.0000", "date": "2026-06-10T09:51:42.000Z", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "fe2a9eb0c395e93cd7e9855c657e11d64904002fdf1916a88c6ec43ca7451e63", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.5.3", "os": "win", "version": "3.6.4.0000", "date": "2026-06-10T09:51:43.000Z", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "692380226452afc70d318bdb034a7e75a565c3c117124fb1b691943ba4d1d38f", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" }, { "r": "4.6.0", "os": "win", "version": "3.6.4.0000", "date": "2026-06-10T09:51:50.000Z", "commit": "73f1899edd046da44dfdb064345e7a4078c20849", "fileid": "61f959996ef97aa55eabe5989b9fea0ba14ae9b4cf0dedcac33b3b23137a1f31", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mayoverse/actions/runs/27267802706" } ] }